Publications

89 entries « 1 of 2 »

2020

Siddiqi MA, Serdijn WA, Strydis C

Zero-Power Defense Done Right: Shielding IMDs from Battery-Depletion Attacks Journal Article

Journal of Signal Processing Systems, 2020.

Links | BibTeX | Tags: SIMS

Miedema R, Smaragdos G, Negrello M, Al-Ars Z, Möller M, Strydis C

Synthesis-Free, Flexible and Fast Hardware Library for Biophysically Plausible Neurosimulations - POSTER Conference

International Symposium on Field-Programmable Gate Arrays , ACM/SIGDA 2020.

Abstract | Links | BibTeX | Tags: BrainFrame

Soloukey Tbalvandany S, Vincent AJPE, Satoer DD, Mastik F, Smits M amd Dirven CMF, Strydis C, Bosch JG, van der Steen AFW, De Zeeuw CI, Koekkoek SKE, Kruizinga P

Functional Ultrasound (fUS) During Awake Brain Surgery: The Clinical Potential of Intra-Operative Functional and Vascular Brain Mapping Journal Article

Frontiers in Neuroscience, 13 , 2020.

Abstract | Links | BibTeX | Tags: CUBE

2019

van der Vlag MA, Smaragdos G, Al-Ars Z, Strydis C

Exploring Complex Brain-Simulation Workloads on Multi-GPU Deployments Journal Article

ACM Transactions on Architecture and Code Optimization (TACO), 16 (4), 2019.

Abstract | Links | BibTeX | Tags: BrainFrame

Neofytou A, Chatzikostantis G, Magkanaris I, Smaragdos G, Strydis C, Soudris D

GPU Implementation of Neural-Network Simulations based on Adaptive-Exponential Models Conference

19th International Conference on Bioinformatics and Bioengineering (BIBE) , IEEE 2019.

Abstract | Links | BibTeX | Tags: BrainFrame

Alfaro-Badilla K, Arroyo-Romero A, Salazar-García C, Vega LGL, Espinoza-González J, Hernández- Castro F, Chacón-Rodríguez A, Smaragdos G, Strydis C

Improving the Simulation of Biologically Accurate Neural Networks Using Data Flow HLS Transformations on Heterogeneous SoC-FPGA Platforms Conference

CARLA 2019, Springer, 2019.

Abstract | Links | BibTeX | Tags: BrainFrame

Flierman NA, Ignashchenkova A, Negrello M, Their P, De Zeeuw CI, Badura A

Glissades Are Altered by Lesions to the Oculomotor Vermis but Not by Saccadic Adaptation Journal Article

Frontiers in Behavioral Neuroscience , 13 , 2019.

Links | BibTeX | Tags: Brain Dynamics

Soloukey Tbalvandany S, Vincent AJPE, Satoer DD, Mastik F, Smits M, Dirven CMF, Strydis C, van der Steen AFW, Bosch JG, De Zeeuw CI, Koekkoek SKE, Kruizinga P

Functional ultrasound (FUS) during awake craniotomy tumor removal: Revolutionizing intra-operative functional brain and tumor mapping Journal Article

Stereotactic and Functional Neurosurgery, 97 , 2019.

Links | BibTeX | Tags: CUBE

Negrello M, Warnaar P, Romano V, Owens CB, Lindeman S, Iavarone E, Spanke JK, Bosman LWJ, De Zeeuw CI

Quasiperiodic rhythms of the inferior olive. Journal Article

PLoS computational biology 2019 , 2019.

Abstract | Links | BibTeX | Tags: Brain Dynamics

Siddiqi MA, Strydis C

IMD security vs. energy: are we tilting at windmills? POSTER Proceeding

ACM Proceedings of the 16th International Conference on Computing Frontiers, 2019.

Abstract | Links | BibTeX | Tags: SIMS

Siddiqi MA, Strydis C

Towards realistic battery-DoS protection of implantable medical devices. Proceeding

ACM Proceedings of the 16th International Conference on Computing Frontiers , 2019.

Links | BibTeX | Tags: SIMS

Vrieler N, Loyola S, Yarden-Rabinowitz Y, Hoogendorp J, Medvedev N, Hoogland TM, De Zeeuw CI, De Schutter E, Yarom Y, Negrello M, Torben-Nielsen B, Uusisaari MY

Variability and directionality of inferior olive neuron dendrites revealed by detailed 3D characterization of an extensive morphological library Journal Article

Brain structure & function, 224 , 2019.

Abstract | Links | BibTeX | Tags: Brain Dynamics

Ju C, Bosman LWJ, Hoogland TM, Velauthapillai A, Murugesan P, Warnaar P, van Genderen RM, Negrello M, De Zeeuw CI

Neurons of the inferior olive respond to broad classes of sensory input while subject to homeostatic control Journal Article

The Journal of Physiology, 597 (9), 2019.

Abstract | Links | BibTeX | Tags: Brain Dynamics

Alfaro-Badilla K, Chacón-Rodríguez A, Smaragdos G, Strydis C, Arroyo-Romero A, Espinoza-González J, Salazar-García C

Prototyping a Biologically Plausible Neuron Model on a Heterogeneous CPU-FPGA Board Conference

IEEE 10th Latin American Symposium on Circuits & Systems (LASCAS), 2019.

Links | BibTeX | Tags: BrainFrame

Chatzikonstantis G, Sidiropoulos H, Strydis C, Negrello M, Smaragdos G, De Zeeuw CI, Soudris DJ

Multinode implementation of an extended Hodgkin–Huxley simulator Journal Article

Elsevier Neuroscomputing, 2019.

Links | BibTeX | Tags: Brain Dynamics, BrainFrame

2018

Siddiqi MA, Seepers RM, Hamad M, Prevelakis V, Strydis C

Attack-tree-based Threat Modeling of Medical Implants Workshop

7th International Workshop on Security Proofs for Embedded Systems (PROOFS 2018), 2018.

Links | BibTeX | Tags: SIMS

Zjajo A, Hofmann J, Christiaanse GJ, van Eijk M, Smaragdos G, Strydis C, de Graaf A, Galuzzi C, van Leuken R

A Real-Time Reconfigurable Multichip Architecture for Large-Scale Biophysically Accurate Neuron Simulation Journal Article

IEEE transactions on biomedical circuits and systems, 2018.

Links | BibTeX | Tags: BrainFrame

2017

Smaragdos G, Chatzikonstantis G, Kukreja R, Sidiropoulos H, Rodopoulos D, Sourdis I, Al-Ars Z, Kachris C, Soudris D, De Zeeuw CI, Strydis C

BrainFrame: A node-level heterogeneous accelerator platform for neuron simulations Journal Article

IOP Journal of Neural Engineering, 2017.

Links | BibTeX | Tags: BrainFrame

Sudhakar SK, Hong S, Raikov I, Publio R, Lang C, Close T, Guo D, Negrello M, De Schutter E

Spatiotemporal network coding of physiological mossy fiber inputs by the cerebellar granular layer Journal Article

PLOS Computational Biology, 2017.

Links | BibTeX | Tags: Brain Dynamics

Ma Y, Geethakumari PR, Smaragdos G, Lindeman S, Romano V, Negrello M, Sourdis I, Bosman LWJ, De Zeeuw CI, Al-Ars Z, Strydis C

Towards Real-Time Whisker Tracking in Rodents for Studying Sensorimotor Disorders Conference

SAMOS 2017, 2017.

Links | BibTeX | Tags: BrainFrame

Chatzikonstantis G, Jiménez D, Meneses E, Strydis C, Sidiropoulos H, Soudris D

From Knights Corner to Landing: a Case Study Based on a Hodgkin-Huxley Neuron Simulator Conference

International Conference on High Performance Computing, 2017.

Links | BibTeX | Tags: BrainFrame

Stamoulias I, Moller M, Miedema R, Strydis C, Kachris C, Soudris D

High-Performance Hardware Accelerators for Solving Ordinary Differential Equations Proceeding

Proceedings of the 8th International Symposium on Highly Efficient Accelerators and Reconfigurable Technologies, 2017.

Links | BibTeX | Tags: BrainFrame

Seepers RM, Wang W, de Haan G, Sourdis I, Strydis C

Attacks on Heartbeat-Based Security Using Remote Photoplethysmography Journal Article

IEEE Journal of Biomedical and Health Informatics, 2017.

Links | BibTeX | Tags: SIMS

Chatzikonstantis G, Rodopoulos D, Strydis C, De Zeeuw CI, Soudris D

Optimizing Extended Hodgkin-Huxley Neuron Model Simulations for a Xeon/Xeon Phi Node Journal Article

IEEE Transactions on Parallel and Distributed Systems, 2017.

Links | BibTeX | Tags: BrainFrame

2016

Seepers RM

Implantable Medical Devices: Device security and emergency access PhD Thesis

Erasmus Medical Center, Rotterdam, 2016.

Links | BibTeX | Tags: SIMS

Negrello M, De Schutter E

Models of the Cortico-cerebellar System Book Chapter

Neuroscience in the 21st Century, 2016.

Links | BibTeX | Tags: Brain Dynamics

Karapatis A, Seepers RM, van Dongen M, Serdijn WA, Strydis C

Balancing Accuracy, Delay and Battery Autonomy for Pervasive Seizure Detection Conference

International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC 2016), 2016.

Links | BibTeX | Tags: SIMS

Theodoropoulos D, Chrysos G, Koidis I, Charitopoulos G, Pissadakis E, Varikos A, Pnevmatikatos D, Smaragdos G, Strydis C, Zervos N

mCluster: A Software Framework for Portable Device-Based Volunteer Computing Conference

16th International Symposium on Cluster, Cloud and Grid Computing (CCGrid 2016), 2016.

Links | BibTeX | Tags: BrainFrame

Kachris C, Soudris D, Gaydadjiev G, Nguyen H, Nikolopoulos DS, Bilas A, Morgan N, Strydis C, Tsalidis C, Balafas J, Jimenez-Peris R, Almeida A

The VINEYARD project: Versatile integrated accelerator-based heterogeneous data centres Conference

MOCAST 2016, 2016.

Links | BibTeX | Tags: BrainFrame

Smaragdos G, Chatzikostantis G, Nomikou S, Rodopoulos D, Sourdis I, Soudris D, De Zeeuw CI, Strydis C

Performance Analysis of Accelerated Biophysically-Meaningful Neuron Simulations Conference

International Symposium on Performance Analysis of Systems and Software, 2016.

Links | BibTeX | Tags: BrainFrame

Chatzikonstantis G, Rodopoulos D, Nomikou S, Strydis C, De Zeeuw CI, Soudris D

First Impressions from Detailed Brain Model Simulations on a Xeon-Xeon Phi Node Conference

ACM International Conference on Computing Frontiers 2016, 2016.

Links | BibTeX | Tags: BrainFrame

Seepers RM, Strydis C, Weber JH, Erkin Z, Sourdis I, De Zeeuw CI

Secure Key-Exchange Protocol for Implants Using Heartbeats Conference

ACM International Conference on Computing Frontiers 2016, 2016.

Links | BibTeX | Tags: SIMS

Kokolis A, Mavrogiannis A, Rodopoulos D, Strydis C, Soudris D

Runtime Interval Optimization and Dependable Performance for Application-Level Checkpointing Conference

DATE 2016, 2016.

Links | BibTeX | Tags: BrainFrame

Kachris C, Soudris D, Gaydadjiev G, Nguyen H, Nikolopoulos DS, Bilas A, Morgan N, Strydis C, Tsalidis C, Balafas J, Jimenez-Peris R, Almeida A

The VINEYARD approach: Versatile, Integrated, Accelerator-based, Heterogeneous Data Centres Conference

ARC 2016, 2016.

Links | BibTeX | Tags: BrainFrame

2015

Seepers RM, Strydis C, Sourdis I, De Zeeuw CI

On Using a Von Neumann Extractor in Heart-Beat-Based Security Conference

IEEE International Conference on Trust, Security and Privacy in Computing and Communications (IEEE TrustCom-15), 2015.

Links | BibTeX | Tags: SIMS

Malek A, Tzilis S, Khan DA, Sourdis I, Smaragdos G, Strydis C

Reducing the Performance Overhead of Resilient CMPs with Substitutable Resources Conference

International Symposium on Defect and Fault Tolerance in VLSI and Nanotechnology Systems (DFTS 2015), 2015.

Links | BibTeX | Tags: Other

Seepers RM, Strydis C, Sourdis I, De Zeeuw CI

Enhancing Heart-Beat-Based Security for mHealth Applications Journal Article

IEEE Journal of Biomedical and Health Informatics, 2015.

Links | BibTeX | Tags: SIMS

Warnaar P, Couto J, Negrello M, Junker M, Smilgin A, Ignashchenkova A, Giugliano M, Thier P, De Schutter E

Duration of Purkinje cell complex spikes increases with their firing frequency Journal Article

Frontiers in Cellular Neuroscience, 2015.

Links | BibTeX | Tags: Brain Dynamics

Ottavi M, Pontarelli S, Gizopoulos D, Bolchini C, Michael MK, Anghel L, Tahoori M, Paschalis A, Reviriego P, Bringmann O, Izosimov V, Manhaeve H, Strydis C, Hamdioui S

Dependable Multicore Architectures at Nanoscale and their Applications: the view from Europe Journal Article

IEEE Design & Test, 2015.

Links | BibTeX | Tags: Other

Nguyen HAD, Al-Ars Z, Smaragdos G, Strydis C

Accelerating complex brain-model simulations on GPU platforms Conference

Design, Automation, and Test in Europe, DATE 2015, 2015.

Links | BibTeX | Tags: BrainFrame

Pagliarini S, Pontarelli S, Mathew J, Pradhan DK, Sourdis I, Khan DA, Malek A, Tzilis S, Smaragdos G, Strydis C

Efficient On-line Testing of an Array of Reconfigurable RISC Processors Workshop

4th MEDIAN Workshop, 2015.

Links | BibTeX | Tags: Other

Kros L, Rooda OE, Spanke J, Alva P, van Dongen M, Karapatis A, Tolner E, Strydis C, Davey N, Winkelman B, Negrello M, Serdijn W, Steuber V, van den Maagdenberg A, de Zeeuw C, Hoebeek F

Cerebellar output controls generalized spike-and-wave discharge occurrence Journal Article

Annals of Neurology, 2015.

Links | BibTeX | Tags: Brain Dynamics

Strydis C, Seepers RM, Karapatis A

Trading detection accuracy for battery autonomy in a wearable seizure-detection device Workshop

1st Workshop On Approximate Computing (WAPCO 2015), 2015.

Links | BibTeX | Tags: SIMS

Sourdis I, Khan DA, Malek A, Tzilis S, Smaragdos G, Strydis C

Resilient CMPs with Mixed-grain Reconfigurability Journal Article

IEEE MICRO, special series on Harsh Chips, 2015.

Links | BibTeX | Tags: Other

2014

van Dongen MN, Karapatis A, Kros L, Eelkman Rooda OHJ, Seepers RM, Strydis C, De Zeeuw CI, Hoebeek FE, Serdijn WA

An implementation of a wavelet-based seizure detection filter suitable for realtime closed-loop epileptic seizure suppression Conference

IEEE Biomedical Circuits and Systems Conference (BioCAS 2014), 2014.

Links | BibTeX | Tags: SIMS

van Eijk M, Galuzzi C, Zjajo A, Smaragdos G, Strydis C, van Leuken R

ESL Design of Customizable Real-Time Neuron Networks Conference

IEEE Biomedical Circuits and Systems Conference (BIOCAS 2014), 2014.

Links | BibTeX | Tags: BrainFrame

Smaragdos G, Khan DA, Sourdis I, Strydis C, Malek A, Tzilis S

A Dependable Coarse-grain Reconfigurable Multicore Array Workshop

21st Reconfigurable Architectures Workshop (RAW 2014), 2014.

Links | BibTeX | Tags: Other

Seepers RM, Strydis C, Peris-Lopez P, Sourdis I, De Zeeuw CI

Peak Misdetection in Heart-Beat-Based Security: Characterization and tolerance Conference

International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC'14), 2014.

Links | BibTeX | Tags: SIMS

Malek A, Tzilis S, Khan DA, Sourdis I, Smaragdos G, Strydis C

A Probabilistic Analysis of Resilient Reconfigurable Designs Conference

International Symposium on Defect and Fault Tolerance in VLSI and Nanotechnology Systems (DFTS 2014), 2014.

Links | BibTeX | Tags: Other

Rodopoulos D, Chatzikonstantis G, Pantelopoulos A, Soudris D, De Zeeuw CI, Strydis C

Optimal Mapping of Inferior Olive Neuron Simulations on the Single-Chip Cloud Computer Conference

International Conference on Embedded Computer Systems: Architectures, Modeling, and Simulation (SAMOS XIV), 2014.

Links | BibTeX | Tags: BrainFrame

89 entries « 1 of 2 »